|
dnaX
|
| |
| Information
for dnaX, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
490636-491187
|
+
|
CDS
|
|
|
adenine phosphoribosyltransferase
|
|
491316-493247
|
+
|
CDS
|
dnaX
|
|
DNA polymerase III; tau and gamma subunits; DNA elongation factor III
|
|
493300-493629
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for dnaX:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.676
|
491241-491264
|
attca GCCTCGCCGTTCTGACGGGGCTGT gttag
|
-
|
0
|
-
|
|
|
|
|
1.676
|
491290-491313
|
aatcc ACCTTCCAGCGTTTCAGAGCCTGC caatg
|
-
|
0
|
-
|
|
|
|
|
0.708
|
491268-491289
|
gtgtt AGCATTACCCCTTCGTGAATCC acctt
|
-
|
0
|
-
|
|
|
|
|
0.615
|
491189-491207
|
ttaat TATCGCCAGTCTTGTGCTG cccac
|
-
|
0
|
-
|
|
|
|
|
0.615
|
491221-491239
|
acgga CAGCACAAGATGTGCATTC agcct
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|