|
ebgA
|
| |
| Information
for ebgA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3219107-3220090
|
+
|
CDS
|
|
|
regulator of ebg operon
|
|
3220238-3223366
|
+
|
CDS
|
ebgA
|
|
evolved beta-D-galactosidase; alpha subunit; cryptic gene
|
|
3223363-3223812
|
+
|
CDS
|
|
|
evolved beta-D-galactosidase; beta subunit; cryptic gene
|
|
| |
Reported regulatory
sites for ebgA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.530
|
3220188-3220204
|
ctttt TAGTAAAAATTTTACTA aactc
|
-
|
0
|
-
|
|
-
|
|
|
4.161
|
3220107-3220128
|
cactg TCCGGCAATCGTTTTTGCCGGA cagtg
|
-
|
0
|
-
|
|
-
|
|
|
2.576
|
3220161-3220178
|
agtta AAGTAAATGCATTTACCT gctac
|
-
|
0
|
-
|
|
-
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.34
|
|
p=0.05
|
2.41
|
|
p=0.1
|
2.01
|
|
p=0.2
|
1.55
|
|
|