emrA
 
Information for emrA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2808791-2809321
+
CDS
regulator of plasmid mcrB operon (microcin B17 synthesis)
2809448-2810620
+
CDS
emrA
multidrug resistance secretion protein
2810637-2812175
+
CDS
multidrug resistance; probably membrane translocase
 
Reported regulatory sites for emrA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
8.109
2809369-2809392
tgact GGCCAGCATCGCAACATGCTGGCC ttttt
-
0
-
6.917
2809404-2809424
gcaag CAGGTCGGCTCAGCCGATGAG ttaag
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.189
2809335-2809354
ctcgc TCAAAAATCCAGATTTATAA aagaa
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

Click here to go back