emrD
 
Information for emrD, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3850517-3850615
-
CDS
ilvB operon leader peptide
3851543-3852733
+
CDS
emrD
2-module integral membrane pump; multidrug resistance
3852741-3853238
-
CDS
putative transcriptional regulator
 
Reported regulatory sites for emrD:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.842
3851517-3851540
actta TTCTAATTATTTTTATAAAAGCAT ccgtg
-
0
-
1.324
3851384-3851401
tctcc CGGCAACATTTATTGCCG ctttt
-
0
-
1.324
3851489-3851506
tctcc CGCATTTATGGGAATGCG tagtg
-
0
-
0.834
3851457-3851478
tctgg CTAACATTCATCAATGTGATAG attcc
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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