|
eutH
|
| |
| Information
for eutH, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2563501-2564904
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2564901-2566127
|
-
|
CDS
|
eutH
|
|
ethanolamine utilization; homolog of Salmonella putative transport protein
|
|
2566344-2567558
|
-
|
CDS
|
|
|
ethanolamine utilization; homolog of Salmonella enzyme; similar to iron-containing alcohol dehydrogenase
|
|
| |
Reported regulatory
sites for eutH:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
8.951
|
2566262-2566285 R
|
agggc GGATAAGGCGTTCACGCCGCATCC gccag
|
-
|
0
|
REP178c (24)
|
|
|
|
|
8.951
|
2566162-2566185 R
|
agggc GGATAAGGCGTTTACGCCGCATCC gccaa
|
-
|
0
|
REP178a (24)
|
|
|
|
|
6.007
|
2566321-2566341 R
|
taaat GCCGGATGCGACGCTTGCCGC atctt
|
-
|
0
|
REP178d (21)
|
|
|
|
|
6.007
|
2566221-2566241 R
|
caatt GCCGGATGCGACGCTTGCCGC gtctt
|
-
|
0
|
REP178b (21)
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.949
|
2566297-2566318 R
|
cgcat CTTATCCAGCCTACGGGATTGC acatg
|
-
|
0
|
REP178d (14)
|
|
|
|
|
4.949
|
2566197-2566218 R
|
cgcgt CTTATCCAGCCTACGGGATTGC acatg
|
-
|
0
|
REP178b (14)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|