fabB
 
Information for fabB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2436962-2438140
-
CDS
putative transport protein
2438405-2439625
-
CDS
fabB
3-oxoacyl-[acyl-carrier-protein] synthase I
2439724-2441790
+
CDS
putative peptidase
 
Reported regulatory sites for fabB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2439673-2439690
fabR
orf hypothetical protein
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
8.541
2439680-2439698 R
atcgg ACTTGTTCGGCGTACAAGT gtacg
fabR
11
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.477
2439702-2439723 R
cgcaa ATTTCTCTATTAAATGGCTGAT cggac
-
0
-
1.477
2439628-2439649 R
actct ATGTGCGACTTACAGAGGTATT gaatg
-
0
-
1.013
2439664-2439679 R
caagt GTACGCTATTGTGCAT tcgaa
fabR
7
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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