fabF
 
Information for fabF, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1150838-1151074
+
CDS
acyl carrier protein
1151162-1152403
+
CDS
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II
1152523-1153332
+
CDS
4-amino-4-deoxychorismate lyase
 
Reported regulatory sites for fabF:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
9.766
1151086-1151107
atctc CAGGCGGTCGTTCGACCGCCTG agttt
-
0
-
5.398
1151139-1151159
tcatt TTTTCCCTCCCTGGAGGACAA acgtg
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.726
1151112-1151135
gagtt TTATCTTTTTGTCCCACTAGAATC atttt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back