fabZ
 
Information for fabZ, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
200971-201996
+
CDS
UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase; third step of endotoxin (lipidA) synthesis
202101-202556
+
CDS
fabZ
(3R)-hydroxymyristol acyl carrier protein dehydratase
202560-203348
+
CDS
UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis
 
Reported regulatory sites for fabZ:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.809
202018-202041
cgcca AACTTTACGGCCTGTCTCATTCTT acgat
-
0
-
3.809
202042-202065
ttctt ACGATTGCGGCAGGCCGTGTTATT attgt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.068
202075-202098
tcgtt TCTTATATTTTGACAGGAAGAGTA tcttg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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