fadR
 
Information for fadR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1232399-1233940
-
CDS
Na+/H+ antiporter; pH independent
1234161-1234880
+
CDS
fadR
negative regulator for fad regulon; and positive activator of fabA
1234932-1236464
-
CDS
putative sporulation protein
 
Reported regulatory sites for fadR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.860
1234110-1234126
tagcc CTCTGGTATGATGAGTC caact
-
0
-
2.279
1233978-1234001
atgtt TTTATGTTTAAACGCAAAGCTTAA cggtc
-
0
-
2.279
1234130-1234153
tccaa CTTTGTTTTGCTGTGTTATGGAAA tctca
-
0
-
1.635
1234080-1234097
tttct TCTTTTTGTCTGCTATCA gcgta
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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