|
fba
|
| |
| Information
for fba, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3066967-3067827
|
-
|
CDS
|
|
|
putative transport protein
|
|
3068185-3069264
|
-
|
CDS
|
fba
|
|
fructose-bisphosphate aldolase; class II
|
|
3069479-3070642
|
-
|
CDS
|
|
|
phosphoglycerate kinase
|
|
| |
Reported regulatory
sites for fba:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.445
|
3069450-3069471 R
|
aatca CAGGGCAGGGAAACCTGCCCTT gtttc
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.816
|
3069272-3069288 R
|
ataag GCCCGACGATACAGGAC aagag
|
-
|
0
|
-
|
|
|
|
|
0.549
|
3069400-3069423 R
|
acgca ATTTTTCATACTCTAAATAATTCG agttg
|
-
|
0
|
IRU13 (22)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|