|
fbp
|
| |
| Information
for fbp, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4451181-4452152
|
+
|
CDS
|
|
|
putative transport system permease protein
|
|
4452185-4453183
|
-
|
CDS
|
fbp
|
|
fructose-bisphosphatase
|
|
4453359-4454732
|
+
|
CDS
|
|
|
putative ligase
|
|
| |
Reported regulatory
sites for fbp:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.663
|
4453304-4453320 R
|
ttacg CATATGTCGGGCAAGTG agaaa
|
-
|
0
|
-
|
|
|
|
|
1.333
|
4453282-4453297 R
|
gaaac GCATTTCAGGATAATC cgtaa
|
-
|
0
|
-
|
|
|
|
|
1.333
|
4453187-4453202 R
|
cataa ACATTGCAGGGAAAGT tttat
|
-
|
0
|
-
|
|
|
|
|
1.333
|
4453292-4453308 R
|
cgggc AAGTGAGAAACGCATTT cagga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|