|
fdrA
|
| |
| Information
for fdrA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
544538-545587
|
-
|
CDS
|
|
|
putative malate dehydrogenase (EC 1.1.1.37)
|
|
545904-547571
|
+
|
CDS
|
fdrA
|
|
involved in protein transport; multicopy suppressor of dominant negative ftsH mutants
|
|
547838-548839
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for fdrA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.211
|
545871-545889
|
cgtgc AATTGCCATGGGTGCAATT tttaa
|
-
|
0
|
-
|
|
|
|
|
4.009
|
545681-545704
|
aaata TAGTTAGAATTTATTTGATAATCC gctca
|
-
|
0
|
-
|
|
|
|
|
4.009
|
545772-545795
|
ggtgg TTATTTGAATTCTTTTGTTAATAA ttcct
|
-
|
0
|
-
|
|
|
|
|
3.543
|
545596-545616
|
tcttc CTTTTTAACGACGGTGTGAAG catga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|