|
fecI
|
| |
| Information
for fecI, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4514332-4515285
|
-
|
CDS
|
|
|
regulator for fec operon; periplasmic
|
|
4515282-4515803
|
-
|
CDS
|
fecI
|
|
probable RNA polymerase sigma factor
|
|
4516095-4516370
|
+
|
CDS
|
|
|
IS1 protein InsA
|
|
| |
Reported regulatory
sites for fecI:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.257
|
4515846-4515862 R
|
ttgta ATGATAACCATTCTCAT attaa
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.754
|
4515965-4515987 R
|
acatc ATGAGTCATTCTGACCGACACAT gccag
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.34
|
|
p=0.05
|
2.41
|
|
p=0.1
|
2.01
|
|
p=0.2
|
1.55
|
|
|