|
fepD
|
| |
| Information
for fepD, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
619419-620411
|
-
|
CDS
|
|
|
ferric enterobactin transport protein
|
|
620408-621412
|
-
|
CDS
|
fepD
|
|
ferric enterobactin (enterochelin) transport
|
|
621523-622773
|
+
|
CDS
|
|
|
putative transport
|
|
| |
Reported regulatory
sites for fepD:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.672
|
621429-621445 R
|
cgata ACGATAATTAATTTCAT tatca
|
-
|
0
|
-
|
|
|
|
|
2.286
|
621447-621463 R
|
aacat ATCCAAATAAGATCGAT aacga
|
-
|
0
|
-
|
|
|
|
|
2.225
|
621502-621519 R
|
attac AATGCCTTGCCATCAAAT atttt
|
-
|
0
|
-
|
|
|
|
|
2.225
|
621467-621484 R
|
tattc TTAGGCTGCACATGCTAA catat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|