ffh
 
Information for ffh, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2743957-2744205
-
CDS
30S ribosomal subunit protein S16
2744454-2745815
-
CDS
ffh
GTP-binding export factor binds to signal sequence; GTP and RNA
2745907-2746773
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for ffh:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.001
2745841-2745860 R
gatga TGTGTCGCGATTGCGGCCAA ccgtt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.583
2745871-2745891 R
acgcc TTCATGTTATACTGCGGCAAA atact
-
0
-
1.570
2745855-2745876 R
actgc GGCAAAATACTGATGATGTGTC gcgat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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