flgA
 
Information for flgA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1129058-1129351
-
CDS
anti-FliA (anti-sigma) factor; also known as RflB protein
1129427-1130086
-
CDS
flgA
flagellar biosynthesis; assembly of basal-body periplasmic P ring
1130241-1130657
+
CDS
flagellar biosynthesis; cell-proximal portion of basal-body rod
 
Reported regulatory sites for flgA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.276
1130149-1130165 R
aacgc AAAATGGGTCGCTATTT atgcc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.885
1130179-1130198 R
aaatg CCTTTACGCGCGCGTTATCG gcgga
-
0
-
2.823
1130168-1130186 R
gcgcg CGTTATCGGCGGAATAAAC gcaaa
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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