|
flgH
|
| |
| Information
for flgH, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1133952-1134734
|
+
|
CDS
|
|
|
flagellar biosynthesis; cell-distal portion of basal-body rod
|
|
1134787-1135485
|
+
|
CDS
|
flgH
|
|
flagellar biosynthesis; basal-body outer-membrane L (lipopolysaccharide layer) ring protein
|
|
1135497-1136594
|
+
|
CDS
|
|
|
homolog of Salmonella P-ring of flagella basal body
|
|
| |
Reported regulatory
sites for flgH:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.850
|
1134764-1134784
|
ggttt ACTGATTTTTGAAGATGATAG ccatg
|
-
|
0
|
-
|
|
|
|
|
1.045
|
1134739-1134755
|
aggct TAACCGGTGGCAGGTTC accgg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|