|
flgK
|
| |
| Information
for flgK, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1136594-1137535
|
+
|
CDS
|
|
|
flagellar biosynthesis
|
|
1137601-1139244
|
+
|
CDS
|
flgK
|
|
flagellar biosynthesis; hook-filament junction protein 1
|
|
1139256-1140209
|
+
|
CDS
|
|
|
flagellar biosynthesis; hook-filament junction protein
|
|
| |
Reported regulatory
sites for flgK:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.222
|
1137580-1137600
|
taatt GAAGGCTTATAAGGAACCTCC atgtc
|
-
|
0
|
-
|
|
|
|
|
2.269
|
1137544-1137566
|
actca AGTCCGGCGGGTCGCTGCCGATA atact
|
-
|
0
|
-
|
|
|
|
|
1.661
|
1137562-1137583
|
gctgc CGATAATACTCTGTAATTGAAG gctta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|