|
flgM
|
| |
| Information
for flgM, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1128637-1129053
|
-
|
CDS
|
|
|
protein of flagellar biosynthesis
|
|
1129058-1129351
|
-
|
CDS
|
flgM
|
|
anti-FliA (anti-sigma) factor; also known as RflB protein
|
|
1129427-1130086
|
-
|
CDS
|
|
|
flagellar biosynthesis; assembly of basal-body periplasmic P ring
|
|
| |
Reported regulatory
sites for flgM:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.712
|
1129413-1129429 R
|
acctg TAAGCTGTTAAAGATTA cccgt
|
-
|
0
|
-
|
|
|
|
|
1.409
|
1129356-1129374 R
|
taaaa GCGCCCTCAATGAGGAATA aacca
|
-
|
0
|
-
|
|
|
|
|
1.125
|
1129391-1129408 R
|
acccg TCCCTTGCCGATAAATAA gcaac
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|