|
fliO
|
| |
| Information
for fliO, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2019110-2019523
|
+
|
CDS
|
|
|
flagellar biosynthesis; component of motor switch and energizing; enabling rotation and determining its direction
|
|
2019586-2019891
|
+
|
CDS
|
fliO
|
|
flagellar biosynthesis
|
|
2019891-2020628
|
+
|
CDS
|
|
|
flagellar biosynthesis
|
|
| |
Reported regulatory
sites for fliO:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.985
|
2019569-2019585
|
ttctg CTGCGCCACTGCTGCAG gtgag
|
-
|
0
|
-
|
|
-
|
|
|
0.090
|
2019547-2019566
|
ctgtg CAATCTTCCGCGCCGGTTTC tgctg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|