|
folD
|
| |
| Information
for folD, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
555884-556117
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
556098-556964
|
-
|
CDS
|
folD
|
|
5;10-methylene-tetrahydrofolate dehydrogenase; 5;10-methylene-tetrahydrofolate cyclohydrolase
|
|
557402-557977
|
+
|
CDS
|
|
|
putative fimbrial-like protein
|
|
| |
Reported regulatory
sites for folD:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.150
|
557016-557037 R
|
aacct GACAGCGCGCCCCGCTTCTGAC aaaat
|
-
|
0
|
-
|
|
|
|
|
1.963
|
557036-557052 R
|
ataaa TCTGAAACGAAACCTGA cagcg
|
-
|
0
|
-
|
|
|
|
|
1.759
|
557066-557085 R
|
gcgcc TCACCTTCGCAAGAGGTCGC ttcac
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|