|
fpr
|
| |
| Information
for fpr, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4110873-4111301
|
+
|
CDS
|
|
|
putative regulator
|
|
4111306-4112052
|
-
|
CDS
|
fpr
|
|
ferredoxin-NADP reductase
|
|
4112149-4113159
|
-
|
CDS
|
|
|
unknown function in glycerol metabolism
|
|
| |
Reported regulatory
sites for fpr:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
7.035
|
4112107-4112128 R
|
gagcc TTCCAGTCCTTCGGGACTGGAA ttttt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.919
|
4112083-4112105 R
|
ggaat TTTTTTGTTCGGAGAACGAAGAT aaggc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|