frdA
 
Information for frdA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4377361-4378095
-
CDS
fumarate reductase; anaerobic; iron-sulfur protein subunit
4378088-4379896
-
CDS
frdA
fumarate reductase; anaerobic; flavoprotein subunit
4380191-4381198
+
CDS
putative lysyl-tRNA synthetase
 
Reported regulatory sites for frdA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4379982-4379997
narL
pleiotrophic regulation of anaerobic respiration: response regulator for nar frd dms and tor genes
 
Species with an ortholog: HI PA ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.049
4380067-4380089 R
attaa ATTAATCATCTTCAGTGATAATT tagcc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.561
4380026-4380046 R
ctaaa AAAATCGATCTCGTCAAATTT cagac
-
0
-
2.122
4379982-4380005 R
gacta TACTGTTGTACCTATAAAGGAGCA gtgga
narL
16
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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