|
frr
|
| |
| Information
for frr, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
191855-192580
|
+
|
CDS
|
|
|
uridylate kinase
|
|
192872-193429
|
+
|
CDS
|
frr
|
|
ribosome releasing factor
|
|
193521-194717
|
+
|
CDS
|
|
|
putative ATP-binding component of a transport system
|
|
| |
Reported regulatory
sites for frr:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.678
|
192853-192871
|
gacaa GTTTTCAAGGATTCGTAAC gtgat
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.643
|
192836-192852
|
ctgtc TGGTCTGACTGAGACAA gtttt
|
-
|
0
|
-
|
|
|
|
|
1.229
|
192593-192610
|
gatgg ATAAATAAGGGTAAGATT ccgcg
|
-
|
0
|
-
|
|
|
|
|
1.229
|
192772-192789
|
tccag ACGATTACCCGTAATATG tttaa
|
-
|
0
|
RSA1 (8)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|