|
fruB
|
| |
| Information
for fruB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2259447-2260385
|
-
|
CDS
|
|
|
fructose-1-phosphate kinase
|
|
2260385-2261515
|
-
|
CDS
|
fruB
|
|
PTS system; fructose-specific IIA/fpr component
|
|
2261883-2263064
|
+
|
CDS
|
|
|
putative transport
|
|
| |
Reported regulatory
sites for fruB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
2261602-2261617
|
|
fruR
|
transcriptional repressor of fru operon and others
|
|
2261535-2261550
|
|
fruR
|
transcriptional repressor of fru operon and others
|
|
| |
| Species with
an ortholog: HI PA ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
7.194
|
2261602-2261617 R
|
gcttt CTTGAAACGTTTCAGC gcgat
|
fruR
|
16
|
-
|
|
|
|
|
7.194
|
2261535-2261550 R
|
tagag GCTGAATCGTTTCAAT tcagc
|
fruR
|
16
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.313
|
2261828-2261851 R
|
cgcgg AGTTTACGCTGCTTGTCAGAAAAT aaaca
|
-
|
0
|
-
|
|
|
|
|
2.313
|
2261671-2261694 R
|
gcaaa AAATTGTGCAGCACATCAAACTTT tgctc
|
-
|
0
|
-
|
|
|
|
|
1.280
|
2261632-2261647 R
|
tttcc TTGCGTGCTGAAACAG aagta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|