|
fruR
|
| |
| Information
for fruR, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
87860-87946
|
+
|
CDS
|
|
|
fruR leader peptide
|
|
88028-89032
|
+
|
CDS
|
fruR
|
|
transcriptional repressor of fru operon and others
|
|
89634-90092
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for fruR:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.522
|
87958-87981
|
gcgct TAGATGTTAATGAATTTAACCCAT accag
|
-
|
0
|
-
|
|
|
|
|
1.809
|
87732-87755
|
tagca GGCACCAGCGGTAAGCTTGATGCA ttttt
|
-
|
0
|
-
|
|
|
|
|
1.809
|
87985-88008
|
atacc AGTACAATGGCTATGGTTTTTACA tttta
|
-
|
0
|
-
|
|
|
|
|
1.536
|
87916-87935
|
gtggg AACCTGGAATAAAAGCAGTT gccgc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|