Full Listing of Genes

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Gene
Annotation
aas
2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase
abc
ATP-binding component of a transporter
abrB
putative transport protein
accB
acetylCoA carboxylase; BCCP subunit; carrier of biotin
accD
acetylCoA carboxylase; carboxytransferase component; beta subunit
aceB
malate synthase A
aceE
pyruvate dehydrogenase (decarboxylase component)
aceK
isocitrate dehydrogenase kinase/phosphatase
ackA
acetate kinase
acnA
aconitate hydrase 1
acnB
aconitate hydrase B
acpD
acyl carrier protein phosphodiesterase
acpP
acyl carrier protein
acrA
acridine efflux pump
acrD
sensitivity to acriflavine; integral membrane protein; possible efflux pump
acrR
acrAB operon repressor
acs
acetyl-CoA synthetase
ada
O6-methylguanine-DNA methyltransferase; transcription activator/repressor
add
adenosine deaminase
adhE
CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase
adhP
alcohol dehydrogenase
adiA
biodegradative arginine decarboxylase
adiY
putative ARAC-type regulatory protein
adk
adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity
aefA
putative alpha helix protein
aer
aerotaxis sensor receptor; flavoprotein
agaR
putative DEOR-type transcriptional regulator of aga operon
agaS
putative tagatose-6-phosphate aldose/ketose isomerase
agaZ
putative tagatose 6-phosphate kinase 2
agp
periplasmic glucose-1-phosphatase
ahpC
alkyl hydroperoxide reductase; C22 subunit; detoxification of hydroperoxides
ahpF
alkyl hydroperoxide reductase; F52a subunit; detoxification of hydroperoxides
aidB
putative acyl coenzyme A dehydrogenase
ais
protein induced by aluminum
alaS
alanyl-tRNA synthetase
aldA
aldehyde dehydrogenase; NAD-linked
aldB
aldehyde dehydrogenase B (lactaldehyde dehydrogenase)
aldH
aldehyde dehydrogenase; prefers NADP over NAD
alkA
3-methyl-adenine DNA glycosylase II; inducible
alr
alanine racemase 1
amiA
N-acetylmuramoyl-l-alanine amidase I
amn
AMP nucleosidase
ampC
beta-lactamase; penicillin resistance
ampD
regulates ampC
amyA
cytoplasmic alpha-amylase
ansA
cytoplasmic L-asparaginase I
ansB
periplasmic L-asparaginase II
ansP
L-asparagine permease
apbA
involved in thiamin biosynthesis; alternative pyrimidine biosynthesis
aphA
diadenosine tetraphosphatase
appA
phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic
appC
probable third cytochrome oxidase; subunit I
apt
adenine phosphoribosyltransferase
aqpZ
transmembrane water channel; aquaporin Z
araB
L-ribulokinase
araC
transcriptional regulator for ara operon
araD
L-ribulose-5-phosphate 4-epimerase
araE
low-affinity L-arabinose transport system proton symport protein
araF
L-arabinose-binding periplasmic protein
araG
ATP-binding component of high-affinity L-arabinose transport system
araJ
involved in either transport or processing of arabinose polymers
arcA
negative response regulator of genes in aerobic pathways; (sensors; ArcB and CpxA)
arcB
aerobic respiration sensor-response protein; histidine protein kinase/phosphatase; sensor for arcA
argA
N-acetylglutamate synthase; amino acid acetyltransferase
argC
N-acetyl-gamma-glutamylphosphate reductase
argD
acetylornithine delta-aminotransferase
argE
acetylornithine deacetylase
argG
argininosuccinate synthetase
argH
argininosuccinate lyase
argI
ornithine carbamoyltransferase 1
argR
repressor of arg regulon; cer-mediated site specific recombination
argS
arginine tRNA synthetase
argT
lysine-; arginine-; ornithine-binding periplasmic protein
aroA
5-enolpyruvylshikimate-3-phosphate synthetase
aroB
3-dehydroquinate synthase
aroF
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase; tyrosine repressible)
aroG
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase; phenylalanine repressible)
aroH
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase; tryptophan repressible)
aroK
shikimate kinase I
aroL
shikimate kinase II
aroM
protein of aro operon; regulated by aroR
aroP
aromatic amino acid transport protein
arsR
transcriptional repressor of chromosomal ars operon
artJ
arginine 3rd transport system periplasmic binding protein
artP
ATP-binding component of 3rd arginine transport system
ascG
ascBF operon repressor
asd
aspartate-semialdehyde dehydrogenase
aslB
putative arylsulfatase regulator
asnA
asparagine synthetase A
asnB
asparagine synthetase B
asnC
regulator for asnA; asnC and gidA
asnS
asparagine tRNA synthetase
aspA
aspartate ammonia-lyase (aspartase)
aspC
aspartate aminotransferase
aspS
aspartate tRNA synthetase
asr
acid shock protein
atoD
acetyl-CoA:acetoacetyl-CoA transferase alpha subunit
atpF
membrane-bound ATP synthase; F0 sector; subunit b
atpG
membrane-bound ATP synthase; F1 sector; gamma-subunit
atpI
membrane-bound ATP synthase; dispensable protein; affects expression of atpB
avtA
alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase; transaminase C
b0005
orf; hypothetical protein
b0235
orf; hypothetical protein
b0379
orf; hypothetical protein
b0380
orf; hypothetical protein
b0502
orf; hypothetical protein
b0539
putative exonuclease (EC 3.1.11.3) similar to lambda
b0753
putative homeobox protein
b0805
putative outer membrane receptor for iron transport
b0817
putative toxin
b0822
orf; hypothetical protein
b0836
putative receptor
b0845
putative DEOR-type transcriptional regulator
b0846
putative DEOR-type transcriptional regulator
b0847
putative transport protein
b0866
orf; hypothetical protein
b0868
putative nucleotide di-P-sugar epimerase or dehydratase
b0878
putative membrane protein
b0919
orf; hypothetical protein
b0947
orf; hypothetical protein
b0955
putative ATP-dependent protease
b0959
orf; hypothetical protein
b0964
orf; hypothetical protein
b0967
putative oxidoreductase
b0968
orf; hypothetical protein
b1012
orf; hypothetical protein
b1045
putative polyprotein
b1057
putative cytochrome
b1085
orf; hypothetical protein
b1168
putative proteases
b1180
putative isomerase
b1191
orf; hypothetical protein
b1200
putative dihydroxyacetone kinase (EC 2.7.1.2)
b1284
putative DEOR-type transcriptional regulator
b1327
orf; hypothetical protein
b1329
putative transport periplasmic protein
b1330
orf; hypothetical protein
b1342
orf; hypothetical protein
b1377
putative outer membrane protein
b1408
probable enzyme
b1423
orf; hypothetical protein
b1428
orf; hypothetical protein
b1431
orf; hypothetical protein
b1432
putative virulence protein
b1436
orf; hypothetical protein
b1439
multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system
b1446
orf; hypothetical protein
b1448
putative resistance protein
b1450
orf; hypothetical protein
b1451
putative outer membrane receptor for iron transport
b1452
putative receptor
b1463
putative N-hydroxyarylamine O-acetyltransferase
b1472
putative outer membrane porin protein
b1481
orf; hypothetical protein
b1491
orf; hypothetical protein
b1498
putative sulfatase
b1501
putative oxidoreductase; major subunit
b1513
putative ATP-binding component of a transport system
b1519
putative enzyme
b1520
orf; hypothetical protein
b1525
putative aldehyde dehydrogenase
b1541
orf; hypothetical protein
b1543
putative transport protein
b1582
orf; hypothetical protein
b1583
orf; hypothetical protein
b1587
putative oxidoreductase; major subunit
b1588
putative oxidoreductase; major subunit
b1592
putative chloride channel
b1593
orf; hypothetical protein
b1598
orf; hypothetical protein
b1600
possible chaperone
b1601
putative transport protein
b1604
orf; hypothetical protein
b1605
putative arginine/ornithine antiporter
b1624
orf; hypothetical protein
b1625
orf; hypothetical protein
b1626
orf; hypothetical protein
b1627
orf; hypothetical protein
b1640
orf; hypothetical protein
b1643
orf; hypothetical protein
b1647
orf; hypothetical protein
b1657
putative transport protein
b1667
orf; hypothetical protein
b1675
orf; hypothetical protein
b1688
orf; hypothetical protein
b1706
orf; hypothetical protein
b1707
orf; hypothetical protein
b1722
orf; hypothetical protein
b1724
orf; hypothetical protein
b1725
orf; hypothetical protein
b1726
orf; hypothetical protein
b1728
orf; hypothetical protein
b1729
part of a kinase
b1731
orf; hypothetical protein
b1741
putative excinuclease subunit
b1758
putative cytochrome oxidase
b1759
orf; hypothetical protein
b1760
orf; hypothetical protein
b1770
putative DEOR-type transcriptional regulator
b1776
putative oxidoreductase
b1781
putative an aldehyde reductase
b1808
putative enzyme
b1809
orf; hypothetical protein
b1811
orf; hypothetical protein
b1815
orf; hypothetical protein
b1820
orf; hypothetical protein
b1821
orf; hypothetical protein
b1825
orf; hypothetical protein
b1826
orf; hypothetical protein
b1827
putative regulator
b1828
putative transport protein
b1832
orf; hypothetical protein
b1833
orf; hypothetical protein
b1836
orf; hypothetical protein
b1841
orf; hypothetical protein
b1843
orf; hypothetical protein
b1904
orf; hypothetical protein
b1953
orf; hypothetical protein
b1955
orf; hypothetical protein
b1956
orf; hypothetical protein
b1957
orf; hypothetical protein
b1966
putative outer membrane protein
b1970
orf; hypothetical protein
b1971
putative reductase
b1973
orf; hypothetical protein
b1976
orf; hypothetical protein
b1983
orf; hypothetical protein
b2016
putative enzyme of sugar metabolism
b2074
putative membrane protein
b2080
orf; hypothetical protein
b2086
orf; hypothetical protein
b2097
orf; hypothetical protein
b2146
putative oxidoreductase
b2248
putative regulator
b2249
orf; hypothetical protein
b2250
orf; hypothetical protein
b2253
putative enzyme
b2258
putative transport/receptor protein
b2290
putative aminotransferase
b2291
putative alpha helix protein
b2294
orf; hypothetical protein
b2295
orf; hypothetical protein
b2299
putative regulator
b2322
putative transport protein
b2324
putative peptidase
b2339
putative fimbrial-like protein
b2340
orf; hypothetical protein
b2342
putative acyltransferase
b2343
orf; hypothetical protein
b2350
orf; hypothetical protein
b2373
putative enzyme
b2374
putative enzyme
b2375
orf; hypothetical protein
b2377
orf; hypothetical protein
b2379
putative aminotransferase
b2380
putative sensor protein
b2389
orf; hypothetical protein
b2390
orf; hypothetical protein
b2392
putative transport system permease
b2431
orf; hypothetical protein
b2432
orf; hypothetical protein
b2434
orf; hypothetical protein
b2462
orf; hypothetical protein
b2463
putative multimodular enzyme
b2466
orf; hypothetical protein
b2475
orf; hypothetical protein
b2494
orf; hypothetical protein
b2496
putative DNA replication factor
b2503
putative cytochrome C-type biogenesis protein
b2504
orf; hypothetical protein
b2505
putative outer membrane lipoprotein
b2511
putative GTP-binding factor
b2531
orf; hypothetical protein
b2532
putative ATP synthase beta subunit
b2534
putative enzyme (3.4.-)
b2595
orf; hypothetical protein
b2603
orf; hypothetical protein
b2619
orf; hypothetical protein
b2659
orf; hypothetical protein
b2666
orf; hypothetical protein
b2667
orf; hypothetical protein
b2670
orf; hypothetical protein
b2680
orf; hypothetical protein
b2682
orf; hypothetical protein
b2710
putative flavodoxin
b2736
putative dehydrogenase
b2740
putative transport protein
b2748
orf; hypothetical protein
b2789
putative transport protein
b2792
orf; hypothetical protein
b2809
orf; hypothetical protein
b2810
orf; hypothetical protein
b2817
putative amidase
b2832
putative transport protein
b2833
orf; hypothetical protein
b2834
orf; hypothetical protein
b2845
putative transporter protein
b2854
orf; hypothetical protein
b2865
putative lipoprotein
b2889
putative enzyme
b2899
putative oxidoreductase
b2970
putative general secretion pathway for protein export (GSP)
b2989
orf; hypothetical protein
b2997
putative hydrogenase subunit
b2998
orf; hypothetical protein
b3001
putative reductase
b3020
putative transport periplasmic protein
b3022
orf; hypothetical protein
b3023
orf; hypothetical protein
b3042
orf; hypothetical protein
b3050
putative oxidoreductase
b3052
putative kinase
b4140
orf; hypothetical protein
b4256
orf; hypothetical protein
bacA
bacitracin resistance; possibly phosphorylates undecaprenol
barA
sensor-regulator; activates OmpR by phophorylation
bax
putative ATP-binding protein
betI
probably transcriptional repressor of bet genes
betT
high-affinity choline transport
bfr
bacterioferrin; an iron storage homoprotein
bglX
beta-D-glucoside glucohydrolase; periplasmic
bioA
7;8-diaminopelargonic acid synthetase
bioB
biotin synthesis; sulfur insertion?
bisC
biotin sulfoxide reductase
blc
outer membrane lipoprotein (lipocalin)
bolA
possible regulator of murein genes
brnQ
branched chain amino acid transport system II carrier protein
btuB
outer membrane receptor for transport of vitamin B12; E colicins; and bacteriophage BF23
btuC
vitamin B12 transport permease protein
btuE
vitamin B12 transport
cadA
lysine decarboxylase 1
cadB
transport of lysine/cadaverine
cadC
transcriptional activator of cad operon
caiB
l-carnitine dehydratase
caiC
probable crotonobetaine/carnitine-CoA ligase
caiF
transcriptional regulator of cai operon
caiT
probable carnitine transporter
carA
carbamoyl-phosphate synthetase; glutamine (small) subunit
cbl
transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM
cbpA
curved DNA-binding protein; functions closely related to DnaJ
cca
tRNA nucleotidyl transferase
cchB
detox protein
cdd
cytidine/deoxycytidine deaminase
cdh
CDP-diacylglycerol phosphotidylhydrolase
cdsA
CDP-diglyceride synthetase
celA
PEP-dependent phosphotransferase enzyme IV for cellobiose; arbutin; and salicin
celB
PEP-dependent phosphotransferase enzyme II for cellobiose; arbutin; and salicin
celC
PEP-dependent phosphotransferase enzyme III for cellobiose; arbutin; and salicin
celF
phospho-beta-glucosidase; cryptic
cfa
cyclopropane fatty acyl phospholipid synthase
chaA
sodium-calcium/proton antiporter
chaB
cation transport regulator
cirA
outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product
citA
putative sensor-type protein
clpB
heat shock protein
clpP
ATP-dependent proteolytic subunit of clpA-clpP serine protease; heat shock protein F21.5
clpX
ATP-dependent specificity component of clpP serine protease; chaperone
cls
cardiolipin synthase; a major membrane phospholipid; novobiocin sensitivity
cmk
cytidylate kinase
cmr
proton motive force efflux pump
cmtB
PTS system; mannitol-specific enzyme II component; cryptic
coaA
pantothenate kinase
cobU
cobinamide kinase/cobinamide phosphate guanylyltransferase
codB
cytosine permease/transport
cof
orf; hypothetical protein
corA
Mg2+ transport; system I
cpdB
2':3'-cyclic-nucleotide 2'-phosphodiesterase
cpsG
phosphomannomutase
cpxR
transcriptional regulator in 2-component system
crcA
orf; hypothetical protein
crcB
orf; hypothetical protein
creA
orf; hypothetical protein
creD
tolerance to colicin E2