fumB
 
Information for fumB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4342507-4343136
-
CDS
orf; hypothetical protein
4343258-4344904
-
CDS
fumB
fumarase B= fumarate hydratase Class I; anaerobic isozyme
4344982-4346322
-
CDS
anaerobic dicarboxylate transport
 
Reported regulatory sites for fumB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.428
4344947-4344970 R
tttgc GTGCCGCCCGTGACTACGCGGCAC gccat
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.342
4344906-4344922 R
tacag AGTTACAGGCTGGAAGC tatgt
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

Click here to go back