|
fumB
|
| |
| Information
for fumB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4342507-4343136
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
4343258-4344904
|
-
|
CDS
|
fumB
|
|
fumarase B= fumarate hydratase Class I; anaerobic isozyme
|
|
4344982-4346322
|
-
|
CDS
|
|
|
anaerobic dicarboxylate transport
|
|
| |
Reported regulatory
sites for fumB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.428
|
4344947-4344970 R
|
tttgc GTGCCGCCCGTGACTACGCGGCAC gccat
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.342
|
4344906-4344922 R
|
tacag AGTTACAGGCTGGAAGC tatgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|