|
galR
|
| |
| Information
for galR, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2971877-2974036
|
-
|
CDS
|
|
|
2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase
|
|
2974621-2975652
|
+
|
CDS
|
galR
|
|
repressor of galETK operon
|
|
2975659-2976921
|
-
|
CDS
|
|
|
diaminopimelate decarboxylase
|
|
| |
Reported regulatory
sites for galR:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
2974591-2974606
|
|
galR
|
repressor of galETK operon
|
|
| |
| Species with
an ortholog: ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
8.940
|
2974130-2974151
|
aaaaa AACCTGCGCATCCGCGCAGGTT ggtgc
|
-
|
0
|
-
|
|
|
|
|
8.940
|
2974332-2974353
|
aaaaa AACCTGCGCATCTGCGCAGGCT ggtgt
|
-
|
0
|
-
|
|
|
|
|
5.435
|
2974198-2974218
|
accaa TCAATACCTCTGGGATCTTGA ttgtg
|
-
|
0
|
-
|
|
|
|
|
5.435
|
2974394-2974414
|
accta TCAATACCTCTGGGATCACCA cttta
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.399
|
2974166-2974182
|
gacag GGTACGAAGAGCGTACC gaata
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|