gapA
 
Information for gapA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1860040-1860453
-
CDS
orf; hypothetical protein
1860795-1861790
+
CDS
gapA
glyceraldehyde-3-phosphate dehydrogenase A
1861853-1862758
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for gapA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.616
1860740-1860759
taagg TTTTTGTAATTTTACAGGCA acctt
-
0
-
4.609
1860762-1860782
gcaac CTTTTATTCACTAACAAATAG ctggt
-
0
-
4.423
1860723-1860739
ttccg CTTGACGCTGCGTAAGG ttttt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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