|
gidB
|
| |
| Information
for gidB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3919688-3920080
|
-
|
CDS
|
|
|
membrane-bound ATP synthase; dispensable protein; affects expression of atpB
|
|
3920685-3921308
|
-
|
CDS
|
gidB
|
|
glucose-inhibited division; chromosome replication?
|
|
3921372-3923261
|
-
|
CDS
|
|
|
glucose-inhibited division; chromosome replication?
|
|
| |
Reported regulatory
sites for gidB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.337
|
3921335-3921358 R
|
aaatg CCTGGTAAGCACCCGCTTACCAGG caacg
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.392
|
3921310-3921328 R
|
aacgc ATCAAGAACAGGTAATCAC cgtgc
|
-
|
0
|
-
|
|
|
|
|
1.179
|
3921357-3921373 R
|
cgcat AACGCATTAAAAATGCC tggta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|