glgS
 
Information for glgS, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3188648-3189712
+
CDS
orf; hypothetical protein
3189755-3189955
-
CDS
glgS
glycogen biosynthesis; rpoS dependent
3190224-3190853
+
CDS
putative oxidoreductase
 
Reported regulatory sites for glgS:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.609
3190037-3190057 R
atata TTTACGCACGTTATGTTTAAA ggcac
-
0
-
2.158
3190137-3190156 R
tttat CTGTGTTAATAATAACACAG gttag
-
0
-
-
1.885
3190001-3190016 R
gggga ATACTGAAATCAGAAA aagca
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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