|
glnL
|
| |
| Information
for glnL, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4051449-4052858
|
-
|
CDS
|
|
|
response regulator for gln (sensor glnL) (nitrogen regulator I; NRI)
|
|
4052870-4053919
|
-
|
CDS
|
glnL
|
|
histidine protein kinase sensor for GlnG regulator (nitrogen regulator II; NRII)
|
|
4054205-4055614
|
-
|
CDS
|
|
|
glutamine synthetase
|
|
| |
Reported regulatory
sites for glnL:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
4053941-4053957
|
|
ntrC
|
response regulator for gln (sensor glnL) (nitrogen regulator I NRI)
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.881
|
4053941-4053957 R
|
tataa TGCACTAAAATGGTGCA acctg
|
ntrC
|
17
|
-
|
|
|
|
|
5.504
|
4054182-4054197 R
|
gtttt AGTTGCCGTGGAAACT tttcg
|
-
|
0
|
-
|
|
|
|
|
4.083
|
4054014-4054031 R
|
ctgta GCCCATCTCTGCATGGGC ttttt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|