|
glnP
|
| |
| Information
for glnP, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
844964-845686
|
-
|
CDS
|
|
|
ATP-binding component of glutamine high-affinity transport system
|
|
845683-846342
|
-
|
CDS
|
glnP
|
|
glutamine high-affinity transport system; membrane component
|
|
846481-847227
|
-
|
CDS
|
|
|
periplasmic glutamine-binding protein; permease
|
|
| |
Reported regulatory
sites for glnP:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.381
|
846349-846372 R
|
tttga TTATTTACACCACGGTAACAGGAA caaca
|
-
|
0
|
-
|
|
|
|
|
1.106
|
846394-846414 R
|
tgagg GGCGCAAACCCGCTCCGGGGC catta
|
-
|
0
|
BOXC11 (6)
|
|
|
|
|
0.433
|
846445-846463 R
|
tgtaa AACGCACTGGCAGTTCCCT ctccc
|
-
|
0
|
BOXC11 (7)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|