glpA
 
Information for glpA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2349036-2350394
-
CDS
sn-glycerol-3-phosphate permease
2350667-2352295
+
CDS
glpA
sn-glycerol-3-phosphate dehydrogenase (anaerobic); large subunit
2352285-2353544
+
CDS
sn-glycerol-3-phosphate dehydrogenase (anaerobic); membrane anchor subunit
 
Reported regulatory sites for glpA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2350552-2350573
crp
cyclic AMP receptor protein
2350502-2350523
crp
cyclic AMP receptor protein
2350543-2350562
glpR
repressor of the glp operon
2350575-2350594
glpR
repressor of the glp operon
2350595-2350614
glpR
repressor of the glp operon
2350635-2350654
glpR
repressor of the glp operon
 
Species with an ortholog: HI PA ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.103
2350502-2350523
aaatt AAATGTGAATTGCCGCACACAT tatta
crp
22
-
3.103
2350594-2350615
agcga ATATGCGCGAAATCAAACAATT catgt
glpR
21
-
1.336
2350399-2350419
ttgat AGCCTCCGTGGCCCGTGGTCT tattt
-
0
-
1.244
2350417-2350434
cgtgg TCTTATTTATGATTAACA gcctg
ihf
14
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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