glpT
 
Information for glpT, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2347955-2349031
-
CDS
glycerophosphodiester phosphodiesterase; periplasmic
2349036-2350394
-
CDS
glpT
sn-glycerol-3-phosphate permease
2350667-2352295
+
CDS
sn-glycerol-3-phosphate dehydrogenase (anaerobic); large subunit
 
Reported regulatory sites for glpT:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2350421-2350456
ihf
integration host factor (IHF)
2350245-2350279
ihf
integration host factor (IHF)
2350146-2350165
glpR
repressor of the glp operon
2350128-2350147
glpR
repressor of the glp operon
2350113-2350132
glpR
repressor of the glp operon
2350552-2350573
crp
cyclic AMP receptor protein
2350502-2350523
crp
cyclic AMP receptor protein
2350543-2350562
glpR
repressor of the glp operon
2350575-2350594
glpR
repressor of the glp operon
2350595-2350614
glpR
repressor of the glp operon
2350635-2350654
glpR
repressor of the glp operon
 
Species with an ortholog: HI PA ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.260
2350502-2350523 R
taata ATGTGTGCGGCAATTCACATTT aattt
crp
22
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.652
2350624-2350646 R
gttcg TTTTTTACCATTTAGCCATAGTA aaaac
glpR
12
-
0.298
2350596-2350613 R
atgaa TTGTTTGATTTCGCGCAT attcg
glpR
18
-
0.298
2350556-2350573 R
aagtg AAACGTGATTTCATGCGT cattt
glpR
crp
7
18
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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