|
gltJ
|
| |
| Information
for gltJ, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
684478-685152
|
-
|
CDS
|
|
|
glutamate/aspartate transport system permease
|
|
685152-685892
|
-
|
CDS
|
gltJ
|
|
glutamate/aspartate transport system permease
|
|
686062-686970
|
-
|
CDS
|
|
|
putative periplasmic binding transport protein
|
|
| |
Reported regulatory
sites for gltJ:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.719
|
686010-686032 R
|
ccagc CCTCTCGATTGTTACGTAGCACG gacag
|
-
|
0
|
-
|
|
|
|
|
3.719
|
685974-685996 R
|
atacg CCTGATGGTCGTTCCCCATCGGG cctga
|
-
|
0
|
REPt58 (23)
|
|
|
|
|
3.445
|
685914-685930 R
|
gtagc AGTTAACGCTGCTACCC tcttt
|
-
|
0
|
-
|
|
|
|
|
3.377
|
685932-685947 R
|
ggtaa CAATCTTCGAGGGTAG cagtt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|