|
gltS
|
| |
| Information
for gltS, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3822837-3824918
|
+
|
CDS
|
|
|
DNA helicase; resolution of Holliday junctions; branch migration
|
|
3825087-3826292
|
-
|
CDS
|
gltS
|
|
glutamate transport
|
|
3826572-3827963
|
+
|
CDS
|
|
|
putative transport protein
|
|
| |
Reported regulatory
sites for gltS:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.462
|
3826469-3826491 R
|
atcta AATATTTAAATGAGATAAATGCA ctttt
|
-
|
0
|
-
|
|
|
|
|
1.462
|
3826428-3826450 R
|
ctttt GGTATTTTTCTGCTTAAAATCCA tgcca
|
-
|
0
|
-
|
|
|
|
|
1.440
|
3826536-3826552 R
|
tggta GCAAAGCGGGCATTTTA gctga
|
-
|
0
|
-
|
|
|
|
|
1.440
|
3826506-3826522 R
|
aaaga GAAAAGCAAACGTTTGC cacat
|
-
|
0
|
-
|
|
|
|
|
0.334
|
3826404-3826425 R
|
ccatg CCATTTGTTCATTAACAGCTGA gaatt
|
-
|
0
|
-
|
|
|
|
|
0.334
|
3826377-3826398 R
|
gaatt TGACCCAGGAAAGCATAACTCG atacc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|