gltX
 
Information for gltX, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2516833-2517225
+
CDS
orf; hypothetical protein
2517277-2518692
-
CDS
gltX
glutamate tRNA synthetase; catalytic subunit
2518951-2519026
+
tRNA
Valine tRNA1; tandemly triplicate
 
Reported regulatory sites for gltX:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2518864-2518878
fis
site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription
2518844-2518858
fis
site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription
2518823-2518837
fis
site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription
 
Species with an ortholog: ST VC PA YP SP EC HI
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.373
2518750-2518766 R
gggag TGATAGAATATCGCCCA cttaa
-
0
-
3.045
2518699-2518721 R
gttgt CGGCATCTTTCTAAACGTAAGGC cattt
-
0
-
2.443
2518922-2518937 R
tggag TCGCATTATAGGGAGA gttca
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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