glyA
 
Information for glyA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2680877-2682076
+
CDS
putative NAGC-like transcriptional regulator
2682274-2683527
-
CDS
glyA
serine hydroxymethyltransferase
2683855-2685045
+
CDS
dihydropteridine reductase; ferrisiderophore reductase activity
 
Reported regulatory sites for glyA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2683708-2683722
metR
regulator for metE and metH
2683730-2683744
metR
regulator for metE and metH
2683641-2683666
purR
transcriptional repressor for pur regulon glyA glnB prsA speA
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.265
2683646-2683661 R
cctga AGGTAATCGTTTGCGT aaatt
purR
16
-
3.853
2683809-2683825 R
aattg ATGTATCTCAAATGCAT cttat
-
0
-
3.853
2683776-2683792 R
tagcc CTGCAATGTAAATGGTT ctttg
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.090
2683533-2683549 R
tattg TTAGCTGAGTCAGGAGA tgcgg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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