glyQ
 
Information for glyQ, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3719957-3722026
-
CDS
glycine tRNA synthetase; beta subunit
3722036-3722947
-
CDS
glyQ
glycine tRNA synthetase; alpha subunit
3723516-3724511
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for glyQ:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.225
3723093-3723116 R
gcggt TATACCTTCCGTAAAGAGCAGTTT gtctg
-
0
-
2.225
3722992-3723015 R
tactg TATATCTTCCATCCAGCGGGTATA ctgat
-
0
-
1.348
3723237-3723260 R
aagca CAACGGGTAAAGGTTGATCCTCTG cgttc
-
0
-
1.061
3723137-3723153 R
accgc CTTCGAACAGTTCCAGG gaagc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back