gmhA
 
Information for gmhA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
240859-243339
-
CDS
putative acyl-CoA dehydrogenase (EC 1.3.99.-)
243543-244121
+
CDS
gmhA
phosphoheptose isomerase
244327-245094
+
CDS
putative amidotransferase
 
Reported regulatory sites for gmhA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.384
243492-243509
ggcgg TATCCGGTACACTGCATT ttgtc
-
0
-
2.874
243369-243388
tgtaa AAACATTTAGCAATATGTTT acaat
-
0
-
2.874
243401-243420
aatta CAACAAAGCTCACATTGTTG ctgtt
-
0
-
2.049
243522-243539
ttaca TTTATGCTGAAGGATATC ctcat
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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