gnd
 
Information for gnd, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2096469-2097635
-
CDS
UDP-glucose 6-dehydrogenase
2097884-2099290
-
CDS
gnd
gluconate-6-phosphate dehydrogenase; decarboxylating
2099917-2100933
-
CDS
IS5 transposase
 
Reported regulatory sites for gnd:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.790
2099294-2099312 R
ggtga TCACACCTGACAGGAGTAT gtaat
-
0
-
2.601
2099350-2099372 R
acttt AATAAGTACTTTGTATACTTATT tgcga
-
0
-
1.488
2099535-2099557 R
gatac ATTATGCTCATCATGACAATCGA agttt
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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