gntK
 
Information for gntK, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3573695-3574693
-
CDS
low-affinity gluconate transport permease protein; interrupted
3574697-3575185
-
CDS
gntK
gluconokinase 2; thermoresistant
3575416-3576357
-
CDS
regulator of gluconate (gnt) operon
 
Reported regulatory sites for gntK:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.387
3575259-3575279 R
aatgt TACCGATAACAGTTACCCGTA acatt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.122
3575202-3575223 R
cactt TGAGCACGACTAACCATGATCA ccaca
-
0
-
4.963
3575386-3575407 R
cgaaa ATGTTAGATTTAGGTTTCACCT tgtca
-
0
-
4.963
3575335-3575356 R
cccac AAATTTGAAGTAGCTCACACTT ataca
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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