gntP
 
Information for gntP, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4546377-4547279
+
CDS
minor fimbrial subunit; D-mannose specific adhesin
4547522-4548865
-
CDS
gntP
gluconate transport system permease 3
4549205-4550389
+
CDS
mannonate hydrolase
 
Reported regulatory sites for gntP:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.833
4549026-4549041 R
tctga AATTGGTTAACCACAT cacaa
crp
15
-
3.833
4548920-4548935 R
cgcaa CAATGGTTGACCAATT tacat
-
0
-
0.416
4549080-4549096 R
atcgg ATGAGATGGCGTATAAG ttcta
-
0
-
0.063
4549166-4549186 R
tcaca TAGTGGGTTCCACAGCAAAGA gacgc
-
0
-
0.063
4548989-4549009 R
cactc TCATGGTTGTTGCTGCAAATT gcagc
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

Click here to go back