gntR
 
Information for gntR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3574697-3575185
-
CDS
gluconokinase 2; thermoresistant
3575416-3576357
-
CDS
gntR
regulator of gluconate (gnt) operon
3576581-3577276
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for gntR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.216
3576516-3576533 R
tcgct CGCTCCGGTCGCGTGCTG atgta
-
0
-
2.216
3576498-3576515 R
tgctg ATGTACGCTTCCGGGGTT ttgcc
-
0
-
1.634
3576445-3576463 R
attga TTTAGTGTATATCTAATAA ttgta
-
0
-
1.549
3576461-3576479 R
agcac AATGCGATGCAATTGATTT agtgt
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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