gntT
 
Information for gntT, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3543260-3543835
+
CDS
orf; hypothetical protein
3544195-3545508
+
CDS
gntT
high-affinity transport of gluconate / gluconate permease
3545619-3547703
-
CDS
4-alpha-glucanotransferase (amylomaltase)
 
Reported regulatory sites for gntT:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
3543959-3543980
crp
cyclic AMP receptor protein
3544015-3544039
gntR
regulator of gluconate (gnt) operon
3544154-3544177
gntR
regulator of gluconate (gnt) operon
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.879
3544019-3544034
gccag ATGTTACCCGTATCAT tcaca
gntR
16
-
5.879
3544160-3544175
aattg ACGTTACCCATAACAA atgaa
gntR
16
-
2.483
3543976-3543991
cctct CATAATTTAAATTTAC cccgc
crp
5
-
2.483
3544072-3544087
gacta CAATAATTAGTTTTAG tgggt
-
0
-
2.348
3544118-3544134
atctc TGTTCCCGATTGGGATA attag
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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