gpmA
 
Information for gpmA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
784856-785908
+
CDS
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase; phenylalanine repressible)
786066-786818
-
CDS
gpmA
phosphoglyceromutase 1
787020-788060
-
CDS
galactose-1-epimerase (mutarotase)
 
Reported regulatory sites for gpmA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
9.180
786844-786862 R
aatat AATGAGAATTATTATCATT aaaag
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.306
786887-786906 R
ttcgc TATGGTTATGCGTAAGCATT gctgt
-
0
-
3.228
786907-786922 R
acact GCGCCACTATTTTCGC tatgg
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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