greA
 
Information for greA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3325431-3325724
+
CDS
orf; hypothetical protein
3325880-3326341
-
CDS
greA
transcription elongation factor: cleaves 3' nucleotide of paused mRNA
3326604-3328037
+
CDS
D-alanyl-D-alanine carboxypeptidase; fraction B; penicillin-binding protein 4
 
Reported regulatory sites for greA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.684
3326550-3326566 R
catac TACGGCGCAACGCCCTA taaag
-
0
-
2.355
3326532-3326547 R
ctata AAGTAAACGATGACCC ttcgg
-
0
-
2.014
3326561-3326576 R
atcga GCCGTCATACTACGGC gcaac
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back