|
grxA
|
| |
| Information
for grxA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
889312-889689
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
889719-889976
|
-
|
CDS
|
grxA
|
|
glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase
|
|
890136-890423
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for grxA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
890033-890075
|
|
oxyR
|
activator hydrogen peroxide-inducible genes
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.655
|
890035-890051 R
|
aatgc AACAGGTTAAACCTACT ttcag
|
oxyR
|
17
|
-
|
|
|
|
|
2.374
|
890050-890071 R
|
agtta TAGCTTTTAGCAATTAATGCAA caggt
|
oxyR
|
22
|
-
|
|
|
|
|
1.343
|
890003-890026 R
|
agcga ATACATTTTAGCGTGATCATTACA ggcat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|